Web resources for the CRISPR Cas System!


Drosophila CRISPR Web Resources

Name

Link

Description

OxfCRISPR

(Liu Lab)

http://www.oxfcrispr.org

Oxford Fly CRISPR Resources

CRISPRflydesign (Bullock Lab)

http://www.crisprflydesign.org/

Offers Cas9 transgenic stocks

DRSC CRISPR finder (Perrimon Lab)

http://www.flyrnai.org/crispr/

A web tool to identify CRISPRs for fly study

FlyCas9

(Ueda Lab)

http://www.shigen.nig.ac.jp/fly/nigfly/cas9/index.jsp

Provides reagents, protocols and online tools for genome engineering by the designer nuclease Cas9 in Drosophila

flyCRISPR (O’Connor-Giles Lab)

http://flycrispr.molbio.wisc.edu/

Fly CRISPR resources

flyCRISPR discussion group

 

https://groups.google.com/forum/#!forum/flycrispr-discussion-group

A forum for sharing developments, insights, ideas and asking questions related to fly CRISPRs

Fly target sites

(Zhang lab)

http://www.genome-engineering.org/crispr/?page_id=41

For application of Cas9 for site-specific genome editing in eukaryotic cells and organisms

 

General CRISPR Resources

 

Name

Link

Description

Addgene CRISPR plasmids

 http://www.addgene.org/CRISPR/

A collection of CRISPR plasmids and reagents

Crass: The CRISPR Assembler

http://ctskennerton.github.io/crass/

A program that searches through raw metagenomic reads for CRISPRs

CRISPI

http://crispi.genouest.org/

A web interface with graphical tools and functions allows users to find CRISPR in personal sequences.

CRISPR Discussion Forum

https://groups.google.com/forum/#!forum/crispr

A forum to discuss Genome Engineering using CRISPR/Cas Systems

CRISPRmap

http://rna.informatik.unifreiburg.de/CRISPRmap

 

Web server provides an automated assignment of newly sequenced CRISPRs to standard classification system

CRISPRs web server

 

http://crispr.u-psud.fr/

A gateway to publicly accessible CRISPRs database and software, including CRISPRFinder, CRISPRdb and CRISPRcompar

CRISPRTarget

http://bioanalysis.otago.ac.nz/CRISPRTarget

Predicts the most likely targets of CRISPR RNAs

E-CRISP

http://www.e-crisp.org

A software tool to design and evaluate CRISPR target sites

Goldstein lab CRISPR

http://wormcas9hr.weebly.com/

A genome engineering resource for the C. elegans research community

Joung lab CRISPR

http://www.crispr-cas.org/

A genome engineering resource for zebrafish research community

Zhang lab Genome Engineering

http://www.genomeengineering.org/

 

CRISPR genome engineering resources website

ZiFiT target design tool

http://zifit.partners.org/ZiFiT/

 

Identifies potential target sites in DNA sequences

 

Contact us for all the synthetic RNA oligonucleotides you need!

Long RNA oligos are available at Biosynthesis Inc.

Please inquire by calling 1-800-227-0627

or by clicking   www.biosyn.com

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Categories: Artificial Nucleic Acids, BNAs, Bridged Nucleic Acids, Cas9 protein, Cellular Reprogramming, CRISPR Cas, DNA Editing, DNA Synthesis, Epigenetics, Genetics, Genome, Human Genetics, In Vitro Transcription, IVT, lncRNA, Long noncoding RNA, miRNA, Phage, Protein, Regulatory RNA, RNA, RNA Editing, RNA Structure, RNA Synthesis, Virus

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1 reply

  1. Thanks for all the information about CRISPR Cas9 systerm! I find very useful information for my articles.

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